Student Publications

Benrashid, E., Adkar, S.S., Bennett, K.M., Zani, S., Cox, M.W., "Total laparoscopic retrieval of inferior vena cava filter," SAGE Open Med Case Rep. 2015 Aug 12;3:2050313X15597356. doi: 10.1177/2050313X15597356. eCollection 2015. PMID: 27489697  PMCID: PMC4857308

Adkar, S.S., Turley, R.S., Benrashid, E., Cox, M.W., Mureebe, L., Shortell, C.K., "Laparotomy during endovascular repair of ruptured abdominal aortic aneurysms increases mortality," J Vasc Surg. 2017 Feb;65(2):356-361. doi: 10.1016/j.jvs.2016.04.051. Epub 2016 Jul 18.  PMID: 27444364

Adkar, S.S., Turley, R.S., Benrashid, E., Lagoo, S., Shortell, C.K., Mureebe, L.., "Perioperative Optimization of Geriatric Lower Extremity Bypass in the Era of Increased Performance Accountability," Ann Vasc Surg. 2017 Jan;38:248-254. doi: 10.1016/j.avsg.2016.05.111. Epub 2016 Aug 12.  PMID: 27531088

Ali ,M., Foster, Y., Brooks, M., Roomiany, , "An Outbreak of Beta-2 Adrenergic Toxicity from Adulterated Heroin," Am J Med. 2016 Aug;129(8):e125-6. doi: 10.1016/j.amjmed.2016.03.027. Epub 2016 Apr 18. PMID: 27103048

Moding, E.J., Min, H.D., Castle, K.D., Ali, M., Woodlief, L., Williams, N., Ma, Y., Kim, Y., Lee, C.L., Kirsch, D.G., "An extra copy of p53 suppresses development of spontaneous Kras-driven but not radiation-induced cancer," JCI Insight. 2016 Jul 7;1(10). pii: e86698.  PMID: 27453951  PMCID: PMC4955525

Anderson, G., Winter, P., Lin, K., Nussbaum, D., Cakir, M., Stein, E., Soderquist, R., Ali, M., Loring, C., Leeds, J., Newcomb,R., Stepp, P., Yip, C., Tingley, J., Xu, M., Ryan, M., McCall, S., McRee, A., Counter, C., Der, C., Wood, K., "A landscape of therapeutic cooperativity in KRAS mutant cancers reveals principles for controlling tumor evolution," Manuscript in revision at Cell Reports. April 2017.

Ali, M., Kaltenbrun, E., Anderson, G.R., Stephen, S.J., Arena, S.D., Alberto, B., Counter, C., Wood, K., "Codon bias imposes a targetable limitation on KRAS-driven therapeutic resistance," Nature Communications (in press). April 2017.

Ashton, J.R., Befera, N., Clark, D.P., Qi, Y., Mao, L., Rockman, H.A., Johnson, G.A, Badea, C.T., "Anatomical and functional imaging of myocardial infarction in mice using micro-CT and eXIA 160 contrast agent," Contrast Media Mol Imaging. 2014 Mar-Apr;9(2):161-8. doi: 10.1002/cmmi.1557.    PMID:24523061  PMCID: PMC4017375

Ashton, J.R., Clark, D.P., Moding, E.J., Ghaghada, K., Kirsch, D.G., West, J.L., Badea, C.T., "Dual-energy micro-CT functional imaging of primary lung cancer in mice using gold and iodine nanoparticle contrast agents: a validation study," PLoS One. 2014 Feb 10;9(2):e88129. doi: 10.1371/journal.pone.0088129. eCollection 2014. PMID: 24520351   PMCID: PMC3919743

Liu, Y., Ashton, J.R., Moding, E.J., Yuan, H., Register, J.K., Fales, A.M.4, Choi, J., Whitley, M.J., Zhao, X., Qi, Y., Ma, Y., Vaidyanathan, G., Zalutsky, M.R., Kirsch, D.G., Badea, C.T., Vo-Dinh, T.1, "A Plasmonic Gold Nanostar Theranostic Probe for In Vivo Tumor Imaging and Photothermal Therapy," Theranostics. 2015 May 23;5(9):946-60. doi: 10.7150/thno.11974. eCollection 2015. PMID: 26155311  PMCID: PMC4493533

Ashton, J.R., West, J.L., Badea, C.T.., "In vivo small animal micro-CT using nanoparticle contrast agents," Front Pharmacol. 2015 Nov 4;6:256. PMID: 26581654  PMCID: PMC4631946

Ashton, J.R., Hoye, J., Deland, K., Whitley, M.J., Qi, Y., Moding, E.J., Kirsch, D.G., West, J., Badea, C.T., "A dual energy CT study on vascular effects of gold nanoparticles in radiation therapy," Proc. SPIE 9788, Medical Imaging 2016: Biomedical Applications in Molecular, Structural, and Functional Imaging, 97780W (March 29, 2016).

Pelot, N.A., Behrend, C., Grill, W., "Modeling the response of small myelinated axons in a compound nerve to kilohertz frequency signals," J Neural Eng. 2017 Mar 31. doi: 10.1088/1741-2552/aa6a5f. [Epub ahead of print]. PMID: 28361793

Hesler, R.A., Huang, J.J., Starr, M.D., Treboschi, V.M., Bernanke, A.G., Nixon, A.B., McCall, S.J., White, R.R., Blobe, G.C., "TGF-β-induced stromal CYR61 promotes resistance to gemcitabine in pancreatic ductal adenocarcinoma through downregulation of the nucleoside transporters hENT1 and hCNT3," Carcinogenesis. 2016 Sep 7. pii: bgw093. [Epub ahead of print].
PMID: 27604902  PMCID: 5091039

Cahill, T.J. 3rd, Thomsen, A.R., Tarrasch, J.T., Plouffe, B., Nguyen, A.H., Yang, F., Huang, L.Y., Kahsai, A.W., Bassoni, D.L., Gavino, B.J., Lamerdin, J.E., Triest, S., Shukla, A.K., Berger,B., Little,  J. 4th, Antar, A., Blanc, A., Qu, C.X., Chen, X., Kawakami, K., Inoue, A., Aoki, J., Steyaert, J., Sun, J.P., Bouvier, M., Skiniotis, G., Lefkowitz, R.J., "Distinct conformations of GPCR-β-arrestin complexes mediate desensitization, signaling, and endocytosis," Proc Natl Acad Sci U S A. 2017 Mar 7;114(10):2562-2567. doi: 10.1073/pnas.1701529114. Epub 2017 Feb 21. PMID: 28223524  PMCID: PMC5347553

Dong, J.H., Wang, Y.J., Cui, M., Wang, X.J., Zheng, W.S., Ma, M.L., Yang, F., He, D.F., Hu, Q.X., Zhang, D.L., Ning, S.L., Liu, C.H., Wang, C., Wang, Y., Li, X.Y., Yi, F., Lin, A., Kahsai, A.W., Cahill, T.J. 3rd, Chen, Z.Y., Yu, X., Sun, J.P., "Adaptive Activation of a Stress Response Pathway Improves Learning and Memory Through Gs and β-Arrestin-1-Regulated Lactate Metabolism," Biol Psychiatry. 2017 Apr 15;81(8):654-670. doi: 10.1016/j.biopsych.2016.09.025. Epub 2016 Oct 13. PMID: 27916196

Hoffmann R, Alvarez S, Mealli C, Falceto A, Cahill TJ 3rd, Zeng T, Manca G. From Widely Accepted Concepts in Coordination Chemistry to Inverted Ligand Fields. Chem Rev. 2016 Jul 27;116(14):8173-92. doi: 10.1021/acs.chemrev.6b00251. Epub 2016 Jul 11. PubMed PMID: 27398715.

Thomsen AR, Plouffe B, Cahill TJ 3rd, Shukla AK, Tarrasch JT, Dosey AM, Kahsai AW, Strachan RT, Pani B, Mahoney JP, Huang L, Breton B, Heydenreich FM, Sunahara RK, Skiniotis G, Bouvier M, Lefkowitz RJ. GPCR-G Protein-β-Arrestin Super-Complex Mediates Sustained G Protein Signaling. Cell. 2016 Aug 11;166(4):907-19. doi: 10.1016/j.cell.2016.07.004. Epub 2016 Aug 4. PubMed PMID: 27499021.

Kahsai, A., Wisler, J., Lee, J., Ahn, S., Cahill, T.J., Dennison, S.M., Staus, D., Thomsen, A., Anasti, K., Pani, B., Wingler, L., Desai, H., Bompiani, K., Strachan, R., Qin, X., Alam, S.M., Sullenger, B., Lefkowitz, R.J., "Conformationally Selective RNA Aptamers Allosterically Modulate the β2-Adrenoceptor," Accepted Nature Chemical Biology, 2016.

Chamessian, A.G., Qadri, Y.J., Cummins, M., Hendrickson, M., Berta, T., Buchheit, T., Van de Ven, T., "5-Hydroxymethylcytosine (5hmC) and Ten-eleven translocation 1-3 (TET1-3) proteins in the dorsal root ganglia of mouse: Expression and dynamic regulation in neuropathic pain," Somatosens Mot Res. 2017 Mar 1:1-8. doi: 10.1080/08990220.2017.1292237. [Epub ahead of print].  PMID: 28276837

Matsuura, K., Huang, N.J., Cocce, K., Zhang, L., Kornbluth, S., "Downregulation of the proapoptotic protein MOAP-1 by the UBR5 ubiquitin ligase and its role in ovarian cancer resistance to cisplatin," Oncogene. 2017 Mar 23;36(12):1698-1706. doi: 10.1038/onc.2016.336. Epub 2016 Oct 10. PMID: 27721409

Stice, J.P., Wardell, S.E., Norris, J.D., Yllanes, A.P., Alley, H.M., Haney, V.O., White, H.S., Safi, R., Winter, P.S., Cocce, K.J., Kishton, R.J., Lawrence, S.A., Strum, J.C., McDonnell, D.P., "CDK4/6 Therapeutic Intervention and Viable Alternative to Taxanes in CPRC," Mol Cancer Res. 2017 Feb 16. pii: molcanres.0028.2016. doi: 10.1158/1541-7786.MCR-17-0028. [Epub ahead of print].  PMID: 28209757

Cocce, K., Jasper, J., Everett, L., Wardell, S., Westerling, T., Baldi, R., Yilanes, A., Blitzer, J., Logsdon, C., Rakiec, D., Ruddy, D., Crawford, G., Brown, M., McDonnell, D.P., "GRHL2 is a Key Lineage Determining Factor Which Defines FOXA1 Cistrome and Regulates a Targetable Collateral Pathway in the Setting of Endocrine Therapy-Resistant Breast Cancer". (in preparation)

Wetzel-Strong, S.E., Detter, M.R., Marchuk, D.A., "The pathobiology of vascular malformations: insights from human and model organism genetics," J Pathol. 2017 Jan;241(2):281-293. doi: 10.1002/path.4844. Epub 2016 Dec 4.  PMID: 27859310  PMCID: PMC5167654.

Waitkus, M.S., Diplas, B.H., Yan, H.., "Isocitrate dehydrogenase mutations in gliomas," Neuro Oncol. 2015 Jul 16. pii: nov136. [Epub ahead of print]. PMID: 26188014

Huang, D.S., Wang, Z., He, X.J., Diplas, B.H, Yang, R., Killela, P.J., Meng, Q., Ye, Z.Y., Wang, W., Jiang, X.T., Xu, L., He, X.L., Zhao, Z.S., Xu, W.J., Wang, H.J., Ma, Y.Y., Xia, Y.J, Li, L., Zhang, R.X., Jin, T., Zhao, Z.K., Xu, J., Yu, S., Wu, F., Liang, J., Wang, S., Jiao, Y., Yan, H., Tao, H.Q.., "Recurrent TERT promoter mutations identified in a large-scale study of multiple tumour types are associated with increased TERT expression and telomerase activation," Eur J Cancer. 2015 May;51(8):969-76. doi: 10.1016/j.ejca.2015.03.010. Epub 2015 Apr 2. PMID: 25843513, PMCID: PMC4467782

Lu, Z., Sheng, J., Zhang, Y., Deng, J., Li, Y., Lu, A., Zhang, J., Yu, H., Zhang, M., Xiong, Z., Yan, H., Diplas, B.H., Lu, Y., Liu, B., "Clonality analysis of multifocal papillary thyroid carcinoma by using genetic profiles," J Pathol. 2016 May;239(1):72-83. doi: 10.1002/path.4696. Epub 2016 Apr 1. PMID: 27071483

M. Draelos, B. Keller, C. Toth, A. Kuo, K. Hauser, and J. Izatt, “Teleopearting robots from arbitrary viewpoints in surgical contexts,” in Intelligent Robots and Systems (IROS 2017), 2017 IEEE/RSJ International Conference on, 2017, submitted March 2017.

O. M. Carrasco-Zevallos, C. Viehland, B. Keller, M. Draelos, A. N. Kuo, C. A. Toth, and J. A. Izatt, “Review of intraoperative optical coherence tomography: technology and applications [invited],” Biomed. Opt. Express, vol. 8, no. 3, pp. 1607–1637, Mar 2017. [Online]. Available: http://www.osapublishing.org/boe/abstract.cfm?URI=boe-8-3-1607

Q. Qiu, Z. Chang, M. Draelos, J. Chen, A. Bronstein, and G. Sapiro, “Low-cost gaze and puls analysis using RealSense,” in MOBIHEALTH 2015, 2015, accepted Aug. 2015.

M. Draelos, Q. Qiu, A. Bronstein, and G. Sapiro, “Intel RealSense = Real low-cost gaze,in Image Processing (ICIP 2015), 2015 IEEE/SPS Internal Conference on, 2015, accepted June 2015.

Goldman, J.A., Kuzu, G., Lee, N., Karasik, J., Gemberling, M., Foglia, M.J., Karra, R., Dickson, A.L., Sun, F., Tolstorukov, M.Y., Poss, K.D., "Resolving Heart Regeneration by Replacement Histone Profiling," Dev Cell. 2017 Feb 27;40(4):392-404.e5. doi: 10.1016/j.devcel.2017.01.013. PMID: 28245924  PMCID: PMC5367476

Foglia, M.J., Cao, J., Tornini, V.A., Poss, K.D., "Multicolor mapping of the cardiomyocyte proliferation dynamics that construct the atrium," Development. 2016 May 15;143(10):1688-96. doi: 10.1242/dev.136606. Epub 2016 Mar 17. PMID: 26989176.

Foglia MJ , Poss KD., "Building and re-building the heart by cardiomyocyte proliferation," Development. 2016 Mar 1;143(5):729-40. doi: 10.1242/dev.132910. PMID:26932668, PMCID: PMC4813344.

Asciutto EK, Gedeon PC, General IJ, Madura JD. Structure and Dynamics Study of LeuT Using the Markov State Model and Perturbation Response Scanning Reveals Distinct Ion Induced Conformational States. J Phys Chem B. 2016 Jun 30. [Epub ahead of print] PubMed PMID: 27311999.

Suryadevara CM, Desai R, Farber SH, Gedeon PC, Swartz A, Snyder D, Herndon J, Healy P, Choi BD, Fecci PE, Sanchez-Perez L, Sampson JH. 369 Chimeric Antigen Receptors Deficient in Lck Signaling Require 4-1BB Costimulation to Expand inVivo, Resist Regulatory T-Cell Suppression, and Treat Solid Tumors in Immune-Intact Hosts. Neurosurgery. 2016 Aug;63 Suppl 1:209-10. doi: 10.1227/01.neu.0000489857.70440.98. PubMed PMID: 27399566.

Choi, B.D., Kuan, C.T., Cai, M., Archer, G.E., Mitchell, D.A., Gedeon, P.C., Sanchez-Perez, L., Pastan, I., Bigner, D.D., Sampson, J.H., "Systemic administration of a bispecific antibody targeting EGFRvIII successfully treats intracerebral glioma," Proc Natl Acad Sci U S A. 2013 Jan 2;110(1):270-5. doi: 10.1073/pnas.1219817110. Epub 2012 Dec 17. PMID: 23248284  PMCID: PMC3538214

Choi, B.D., Gedeon, P.C., Kuan, C.T., Sanchez-Perez, L., Archer, G.E., Bigner, D.D., Sampson, J.H., "Rational design and generation of recombinant control reagents for bispecific antibodies through CDR mutagenesis," J Immunol Methods. 2013 Sep 30;395(1-2):14-20. doi: 10.1016/j.jim.2013.06.003. Epub 2013 Jun 24. PMID: 23806556  PMCID: PMC3746479

Gedeon, P.C., Choi, B.D., Hodges, T.R., Mitchell, D.A., Bigner, D.D., Sampson, J.H., "An EGFRvIII-targeted bispecific T-cell engager overcomes limitations of the standard of care for glioblastoma," Expert Rev Clin Pharmacol. 2013 Jul;6(4):375-86. doi: 10.1586/17512433.2013.811806. PMID: 23927666

Choi, B.D., Suryadevara, C.M., Gedeon, P.C., Herndon, J.E. 2nd, Sanchez-Perez, L., Bigner, D.D., Sampson, J.H., "Intracerebral delivery of a third generation EGFRvIII-specific chimeric antigen receptor is efficacious against human glioma," J Clin Neurosci. 2014 Jan;21(1):189-90. doi: 10.1016/j.jocn.2013.03.012. Epub 2013 Sep 17. PMID: 24054399

Choi, B.D., Gedeon, P.C., Sanchez-Perez, L., Bigner, D.D., Sampson, J.H., " Regulatory T cells are redirected to kill glioblastoma by an EGFRvIII-targeted bispecific antibod," Oncoimmunology. 2013 Dec 1;2(12):e26757. Epub 2013 Oct 22. PMID: 24475376 PMCID: PMC3891636

Choi, B.D., Gedeon, P.C., Herndon, J.E. 2nd, Archer, G.E., Reap, E.A., Sanchez-Perez, L., Mitchell, D.A., Bigner, D.D., Sampson, J.H., "Human regulatory T cells kill tumor cells through granzyme-dependent cytotoxicity upon retargeting with a bispecific antibody," Cancer Immunol Res. 2013;1(3):163. PMID: 24570975

Gedeon, P.C., Choi, B.D., Sampson, J.H., Bigner, D.D., “RINDOPEPIMUT: Anti-EGFRvIII Peptide Vaccine Oncolytic. Drugs of the Future,” 2013; 38(3):147-155.

Thomas, J.R., Gedeon, P.C., Madura, J.D., “Structural dynamics of the monoamine transporter homolog LeuT from accelerated conformational sampling and channel analysis,” Proteins. 2014; 82(10): 2289-302. doi: 10.1002/prot.24588. PMID: 24753369. PMCID: PMC4177338

Gedeon, P.C., Riccione, K.A., Fecci, P.E., Sampson, J.H., “Antibody-based immunotherapy for malignant glioma,” Seminars in Oncology. 2014; 41(4):496-510. doi: 10.1053/j.seminoncol.2014.06.004. PMID: 25173142  PMCID:4151824

Congdon K.L., Gedeon P.C., Suryadevara C.M., Caruso H.G., Cooper L.J.N., Heimberger A.B., Sampson J.H., “Epidermal growth factor receptor and variant III targeted immunotherapy,” Neuro-Oncology. 2014; 16(Suppl 8): viii20-viii25. doi: 10.1093/neuonc/nou236. PMID: 25342601 PMCID: PMC4207138

Gedeon P.C., Thomas J.R., Madura J.D., “Accelerated molecular dynamics and protein conformational change: a theoretical and practical guide using a membrane embedded model neurotransmitter transporter,” Methods in Molecular Biology. 2015; 1215:253-287. doi: 10.1007/978-1-4939-1465-4_12. PMID: 25330967 PMCID: PMC4207138

Suryadevara C.M., Gedeon P.C., Sanchez-Perez L., Verla T., Alvarez-Breckenridge C., Choi B.D., Fecci P.E., Sampson J.H., “Are BiTEs the "missing link" in cancer therapy?” Oncoimmunology. 2015; 4(6):e1008339. doi: 10.1080/2162402X.2015.1008339. PMID: 26155413 PMCID: PMC4485829

Gokhale, T.A., Kim, J.M., Kirkton, R.D., Bursac, N., Henriquez, C.S., "Modeling an Excitable Biosynthetic Tissue with Inherent Variability for Paired Computational-Experimental Studies," PLoS Comput Biol. 2017 Jan 20;13(1):e1005342. doi: 10.1371/journal.pcbi.1005342. eCollection 2017. PMID: 28107358  PMCID: PMC5291544

Gokhale, T.A., Medvescek, E., Henriquez, C.S., “Continuous Models Fail to Capture Details of Reentry in Fibrotic Myocardium,” Computing in Cardiology 2016. 43.  doi: 10.22489/CinC.2016.052-487

Gokhale, T.A., “Machine Learning Based Identification of Pathological Heart Sounds,” Computing in Cardiology 2016. 43. doi: 10.22489/CinC.2016.159-485

Pirozzi, C.J., Carpenter, A.B., Waitkus, M.S., Wang, C.Y., Zhu, H., Hansen, L.J., Chen, L.H., Greer, P.K., Feng, J., Wang, Y., Bock, C.B., Fan, P., Spasojevic, I., McLendon, R.E., Bigner, D.D., He, Y., Yan, H., "Mutant IDH1 Disrupts the Mouse Subventricular Zone and Alters Brain Tumor Progression,"Mol Cancer Res. 2017 May;15(5):507-520. doi: 10.1158/1541-7786.MCR-16-0485. Epub 2017 Feb 1. PMID: 28148827  PMCID: PMC5415422

Hanks, B., Holtzhausen, A., Evans, K., Jamieson, R., Gimpel, P., Campbell, O., Hector-Greene, M., Sun, L., Tewari, A., George, A., Starr, M., Nixon, A., Augustine, C., Beasley, G., Tyler, D., Osada, T., Morse, M., Ling, L., Lyerly, H.K., Blobe, G.C. "TβRIII Downregulation Promotes Dendritic Cell Tolerization in the Tumor Microenvironment," J Clin Invest. 2013 Sep 3;123(9):3925-40. doi: 10.1172/JCI65745. Epub 2013 Aug 8. PMID:23925295 PMCID:PMC3754240

Hector-Greene, M.E., Blobe, G.C. “Dalantercept”, Drugs of the Future 2015, 40(10). DOI: 10.1358/dof.2015.040.10. 2386993.

Tazat, K., Hector-Greene, M., Blobe, G.C., Henis, Y.I. “TβRIII independently binds type I and type II TGF-β receptors to inhibit TGF-β signaling,” Mol Biol Cell. 2015 Oct 1;26(19):3535-45. PMID: 26269580  PMCID: PMC4591696

Pomeraniec, L., Hector-Greene, M., Ehrlich, M., Blobe, G.C., Henis, Y.I. “Regulation of TGF-β receptor hetero-oligomerization and signaling by endoglin,” Mol Biol Cell. 2015 Sep 1;26(17):3117-27. PMID: 26157163  PMCID: PMC4551323

Tazat K, Hector-Greene M, Blobe GC, Henis YI.TβRIII independently binds type I and type II TGF-β receptors to inhibit TGF-β signaling. Mol Biol Cell. 2015 Oct 1;26(19):3535-45. doi: 10.1091/mbc.E15-04-0203. Epub 2015 Aug 12. PMID: 26269580 Free PMC Article

Hesler, R.A., Huang, J.J., Starr, M.D., Treboschi, V.M., Bernanke, A.G., Nixon, A.B., McCall, S.J., White, R.R., Blobe, G.C., GF-β-induced stromal CYR61 promotes resistance to gemcitabine in pancreatic ductal adenocarcinoma through downregulation of the nucleoside transporters hENT1 and hCNT3," Carcinogenesis. 2016 Sep 7. pii: bgw093. [Epub ahead of print]  PMID: 27604902  PMCID: PMC5091039

Huang, J.J., Blobe, G.C., "Dichotomous roles of TGF-β in human cancer," Biochem Soc Trans. 2016 Oct 15;44(5):1441-1454. D:27911726

Elderbroom, J.*, Huang, J.*, Gatza, C., Chen, J., How, T., Starr, M., Nixon, A., Blobe, G., "Ectodomain shedding of TβRIII is required for TβRIII-mediated suppression of TGF-β signaling and breast cancer cell migration and invasion," Mol Bio Cell. 25(16):2320-32, 2014. *co-first authors. PMID: 24966170  PMCID: PMC4142606

Mulkey, S.B., Ben-Zeev, B., Nicolai, J., Carroll, J.L., Grønborg, S., Jiang, Y.H., Joshi, N., Kelly, M., Koolen, D.A., Mikati, M.A., Park, K., Pearl, P.L., Scheffer, I.E., Spillmann, R.C., Taglialatela, M., Vieker, S., Weckhuysen, S., Cooper, E.C., Cilio, M.R., "Neonatal nonepileptic myoclonus is a prominent clinical feature of KCNQ2 gain-of-function variants R201C and R201H," Epilepsia. 2017 Mar;58(3):436-445. doi: 10.1111/epi.13676. Epub 2017 Jan 31. PMID: 28139826  PMCID: PMC5339037

Khatri A, Wang J, Pendergast AM. “Multifunctional Abl kinases in health and disease,”. J Cell Sci. 2016 Jan 1;129(1):9-16. doi: 10.1242/jcs.175521. Review. PMID:26729027

K Krishnamurthy & DT Laskowitz. “Cellular and Molecular Mechanisms of Secondary Neuronal Injury Following Traumatic Brain Injury.” Translational Research in Traumatic Brain Injury. Ed. Daniel Laskowitz & Gerald Grant. Boca Raton (FL): CRC Press/Taylor and Francis Group; 2016. Chapter 5. Frontiers in Neuroscience.

Winter, P.S, Sarosiek, K.A., Lin K,H., Meggendorfer, M., Schnittger, S, Letai, A., Wood, K.C., "RAS signaling promotes resistance to JAK inhibitors by suppressing BAD-mediated apoptosis," Sci Signal. 2014 Dec 23;7(357):ra122. doi: 10.1126/scisignal.2005301. PMID: 25538080 PMCID: PMC4353591

Misale, S., Bozic, I., Tong, J., Peraza-Penton, A., Lallo, A.1,8, Baldi, F., Lin, K.H., Truini, M., Trusolino, L.1,, Bertotti, A.18, Di Nicolantonio, F.1, Nowak, M.A., Zhang, L.5,, Wood, K.C, Bardelli, A.1,., "Vertical suppression of the EGFR pathway prevents onset of resistance in colorectal cancers," Nat Commun. 2015 Sep 22;6:8305. doi: 10.1038/ncomms9305. PMID: 26392303 PMCID: PMC4595628

McClean, C.M., Tobin, D.M., "Macrophage form, function, and phenotype in mycobacterial infection: lessons from tuberculosis and other diseases," Pathog Dis. 2016 Oct;74(7). pii: ftw068. doi: 10.1093/femspd/ftw068. Epub 2016 Jul 10.  PMID: 27402783

Yang, C.F., Meyerhoff, R.R., Mayne, N.R., Singhapricha, T., Toomey, C.B., Speicher, P.J., Hartwig, M.G., Tong, B.C., Onaitis, M.W., "Harpole DH Jr1, D'Amico TA1, Berry MF., "Long-term survival following open versus thoracoscopic lobectomy after preoperative chemotherapy for non-small cell lung cancer," Eur J Cardiothorac Surg. 2016 Jun;49(6):1615-23. doi: 10.1093/ejcts/ezv428. Epub 2015 Dec 30. PMID: 26719408  PMCID: PMC4867396

Yang, C.F., Mayne, N.R., Wang, H., Meyerhoff, R.R., Hirji, S., Tong, B.C., Hartwig, M., Harpole, D. Jr, D'Amico, T.A., Berry, M., "Outcomes of Major Lung Resection After Induction Therapy for Non-Small Cell Lung Cancer in Elderly Patients," Ann Thorac Surg. 2016 Sep;102(3):962-70. doi: 10.1016/j.athoracsur.2016.03.088. Epub 2016 May 25. PMID: 27234579  PMCID: PMC5142525

Yang, C.J., Yan, B.W., Meyerhoff, R.R., Saud, S.M., Gulack, B.C., Speicher, P.J., Hartwig, M.G., D'Amico, T.A., Harpole, D.H., Berry, M.F., "Impact of Age on Long-Term Outcomes of Surgery for Malignant Pleural Mesothelioma," Clin Lung Cancer. 2016 Sep;17(5):419-426. doi: 10.1016/j.cllc.2016.03.002. Epub 2016 Mar 17. PMID: 272363686  PMCID: PMC5026893

Alam, S.M., Aussedat, B., Vohra, Y., Meyerhoff, R.R., Cale, E.M., Walkowicz, W.E., Radakovich, N.A., Anasti, K., Armand, L., Parks, R., Sutherland, L., Scearce, R., Joyce, M.G., Pancera, M., Druz, A., Georgiev, I.S., Von Holle, T., Eaton, A., Fox, C., Reed, S.G., Louder, M., Bailer, R.T., Morris, L., Abdool-Karim, S.S., Cohen, M., Liao, H.X., Montefiori, D.C., Park, P.K., Fernández-Tejada, A., Wiehe, K., Santra, S., Kepler, T.B., Saunders, K.O., Sodroski, J., Kwong, P.D., Mascola, J.R., Bonsignori, M., Moody, M.A., Danishefsky, S., Haynes, B.F., "Mimicry of an HIV broadly neutralizing antibody epitope with a synthetic glycopeptide," Sci Transl Med. 2017 Mar 15;9(381). pii: eaai7521. doi: 10.1126/scitranslmed.aai7521. PMID:28298421

Bonsignori, M., Kreider, E.F., Fera, D., Meyerhoff, R.R., Bradley, T., Wiehe, K., Alam, S.M., Aussedat, B., Walkowicz, W.E., Hwang, K.K., Saunders, K.O., Zhang, R., Gladden, M.A., Monroe, A., Kumar, A., Xia, S.M., Cooper, M., Louder, M.K., McKee, K., Bailer, R.T., Pier, B.W., Jette, C.A., Kelsoe, G.2., Williams, W.B., Morris, L., Kappes, J., Wagh, K., Kamanga, G., Cohen, M.S., Hraber, P.T., Montefiori, D.C., Trama, A., Liao, H.X., Kepler, T.B., Moody, M.A., Gao, F., Danishefsky, S.J., Mascola, J.R., Shaw, G.M., Hahn, B.H., Harrison, S.C., Korber, B.T., Haynes, B.F., "Staged induction of HIV-1 glycan-dependent broadly neutralizing antibodies," Sci Transl Med. 2017 Mar 15;9(381). pii: eaai7514. doi: 10.1126/scitranslmed.aai7514. PMID: 28298420

Saunders, K.O., Nicely, N.I., Wiehe, K., Bonsignori, M., Meyerhoff, R.R., Parks, R., Walkowicz, W.E., Aussedat, B., Wu, N.R., Cai, F., Vohra, Y., Park, P.K., Eaton, A., Go, E.P., Sutherland, L.L., Scearce, R.M., Barouch, D.H., Zhang, R., Von Holle, T., Overman, R.G., Anasti, K., Sanders, R.W., Moody, M.A., Kepler, T.B., Korber, B., Desaire, H., Santra, S., Letvin, N.L., Nabel, G.J., Montefiori, D.C., Tomaras, G.D., Liao, H.X., Alam, S.M., Danishefsky, S.J., Haynes, B.F., "Vaccine Elicitation of High Mannose-Dependent Neutralizing Antibodies against the V3-Glycan Broadly Neutralizing Epitope in Nonhuman Primates," Cell Rep. 2017 Feb 28;18(9):2175-2188. doi: 10.1016/j.celrep.2017.02.003. PMID: 28249163

Yang CF1, Meyerhoff RR2, Stephens SJ1, Singhapricha T1, Toomey CB1, Anderson KL1, Kelsey C3, Harpole D1, D'Amico TA1, Berry MF4., "Long-Term Outcomes of Lobectomy for Non-Small Cell Lung Cancer After Definitive Radiation Treatment," Ann Thorac Surg. 2015 Jun;99(6):1914-20. doi: 10.1016/j.athoracsur.2015.01.064. Epub 2015 Apr 15. PMID:

Yang, C.F., Adil, S.M., Anderson, K.L., Meyerhoff R.R., Turley, R.S., Hartwig, M.G., Harpole, D.H. Jr,, Tong, B.C., Onaitis, M.W., D'Amico, T.A., Berry, M.F., "Impact of patient selection and treatment strategies on outcomes after lobectomy for biopsy-proven stage IIIA pN2 non-small cell lung cancer," Eur J Cardiothorac Surg. 2016 Jun;49(6):1607-13. doi: 10.1093/ejcts/ezv431. Epub 2015 Dec 30. PMID: 26719403  PMCID: PMC4867397

Yang, C.F., Meyerhoff, R.R., Stephens, S.J., Singhapricha, T., Toomey, C.B., Anderson, K.L., Kelsey, C., Harpole, D., D'Amico, T.A., Berry, M.F.., "Long-Term Outcomes of Lobectomy for Non-Small Cell Lung Cancer After Definitive Radiation Treatment," Ann Thorac Surg. 2015 Jun;99(6):1914-20. doi: 10.1016/j.athoracsur.2015.01.064. Epub 2015 Apr 15. PMID25886806  PMCID: PMC4458187

Meyerhoff, R.R., Yang, C.F., Speicher, P.J., Gulack, B.C., Hartwig, M.G., D'Amico, T.A., Harpole, D.H.2, Berry, M.F., "Impact of mesothelioma histologic subtype on outcomes in the Surveillance, Epidemiology, and End Results database," J Surg Res. 2015 Jun 1;196(1):23-32. doi: 10.1016/j.jss.2015.01.043. Epub 2015 Jan 29. PMID: 25791825  PMCID: PMC4430361

Mueller SB, Kontos CD. Tie1: an orphan receptor provides context for angiopoietin-2/Tie2 signaling. J Clin Invest. 2016 Aug 22. pii: 89963. doi: 10.1172/JCI89963. [Epub ahead of print] PubMed PMID: 27548526.

Mueller, S.B., Kontos, C.D., "Gene therapy for the prevention of vein graft disease," Chapter in Translation Gene Therapy to the Clinic. Editors: Jeffrey Laurence and Michael Franklin. Elsevier 2015. ISBN: 978-0-12-800563-7

McClung, J.M., Reinardy, J.L., Mueller, S.B., McCord, T.J., Kontos, C.D., Brown, D.A., Hussain, S.N.A., Schmidt, C.A., Ryan, T.E., Green, T.D., "Muscle Cell derived angiopoietin-1 contributes to both myogenesis and angiogenesis in the ischemic environment," Front Physiol. 2015 May; 6:161. PMID: 26042050  PMCID: PMC4436568

Reinardy, J.L., Corey, D.M., Golzio, C., Mueller, S.B., Katsanis, N., Kontos, C.D., "Phosphorylation of Threonine 794 on Tie1 by Rac1/PAK1 reveals a novel angiogenesis regulatory pathway," PLoS One. 2015 Oct 5;10(10):e0139614.
PMID: 26436659  PMCID: PMC4593579

Southerland, K.W.*, Frazier, S.B.*, Bowles, D.E., Milano, C.A., Kontos, C.D., "Gene therapy for the prevention of vein graft disease." Transl Res. 2013;161:321-38. *Equal contribution first authors. PMID: 23274305

Fan, Q., Nelson, C.S., Bialas, K.M., Chiuppesi, F., Amos, J., Gurley, T.C., Marshall, D.J., Eudailey, J., Heimsath, H., Himes, J., Deshpande, A., Walter, M.R., Wussow, F., Diamond, D.J., Barry, P.A., Moody, M.A., Kaur, A., Permar, S.R., "Plasmablast Response to Primary Rhesus Cytomegalovirus Infection in a Monkey Model of Congenital CMV Transmission," Clin Vaccine Immunol. 2017 Mar 15. pii: CVI.00510-16. doi: 10.1128/CVI.00510-16. [Epub ahead of print] PMID: 28298291

Nelson CS, Pollara J, Kunz EL, Jeffries TL Jr, Duffy R, Beck C, Stamper L, Wang M, Shen X, Pickup DJ, Staats HF, Hudgens MG, Kepler TB, Montefiori DC, Moody MA, Tomaras GD, Liao HX, Haynes BF, Ferrari G, Fouda GG, Permar SR. “Combined HIV-1 Envelope Systemic and Mucosal Immunization of Lactating Rhesus Monkeys Induces a Robust Immunoglobulin A Isotype B Cell Response in Breast Milk” J Virol. 2016 Apr 29;90(10):4951-65. doi: 10.1128/JVI.00335-16. Print 2016 May 15.PMID: 26937027

Bialas, K.M., Westreich, D., Cisneros de la Rosa, E., Nelson, C.S., Kauvar, L.M., Fu, T.M., Permar, S.R., "Maternal Antibody Responses and Nonprimary Congenital Cytomegalovirus Infection of HIV-1-Exposed Infants," J Infect Dis. 2016 Dec 15;214(12):1916-1923. Epub 2016 Oct 20.  PMID: 27923951  PMCID: PMC5142097

Diekman, B.O.1, Thakore, P.I., O'Connor, S.K., Willard, V.P., Brunger, J.M., Christoforou, N., Leong, K.W., Gersbach, C.A., Guilak, F., "Knockdown of the cell cycle inhibitor p21 enhances cartilage formation by induced pluripotent stem cells," Tissue Eng Part A. 2015 Apr;21(7-8):1261-74. doi: 10.1089/ten.TEA.2014.0240. Epub 2015 Jan 23.  PMID: 25517798  PMCID: PMC4394871

Vernekar, V.N., Wallace, C.S., Wu, M., Chao, J.T., O'Connor, S.K., Raleigh, A., Liu, X., Haugh, J.M., Reichert, W.M., "Bi-ligand surfaces with oriented and patterned protein for real-time tracking of cell migration," Colloids Surf B Biointerfaces. 2014 Nov 1;123:225-35. doi: 10.1016/j.colsurfb.2014.09.020. Epub 2014 Sep 19. PMID: 25262410  PMCID: PMC4259856

Petty, A.J., Yang ,Y., "Tumor-associated macrophages: implications in cancer immunotherapy," Immunotherapy. 2017 Mar;9(3):289-302. doi: 10.2217/imt-2016-0135. PMID:28231720

Scherr KA, Fagerlin A, Wei JT, Williamson LD, Ubel PA. Treatment Availability Influences Physicians' Portrayal of Robotic Surgery During Clinical Appointments. Health Commun. 2016 May 6:1-7. [Epub ahead of print] PubMed PMID: 27153051.

Fridman I, Scherr KA, Glare PA, Higgins ET. Using a Non-Fit Message Helps to De-Intensify Negative Reactions to Tough Advice. Pers Soc Psychol Bull. 2016 Aug;42(8):1025-44. doi: 10.1177/0146167216649931. PubMed PMID: 27341845.

Scherr KA, Fagerlin A, Williamson LD, Davis JK, Fridman I, Atyeo N, Ubel PA. The Physician Recommendation Coding System (PhyReCS): A Reliable and Valid Method to Quantify the Strength of Physician Recommendations During Clinical Encounters. Med Decis Making. 2016 Jun 24. pii: 0272989X16654692. [Epub ahead of print] PubMed PMID: 27343015.

Scherr KA, Fagerlin A, Hofer T, Scherer LD, Holmes-Rovner M, Williamson LD, Kahn VC, Montgomery JS, Greene KL, Zhang B, Ubel PA. "Physician Recommendations Trump Patient Preferences in Prostate Cancer Treatment Decisions." Med Decis Making. 2016 Aug 10. pii: 0272989X16662841. [Epub ahead of print] PMID: 27510740

Scherr, K.A., Fagerlin, A, Wei, J.T., Williamson, L.D., Ubel, P.A.., “Treatment Availability Influences Physicians' Portrayal of Robotic Surgery During Clinical Appointments." Health Communication. Forthcoming 2015. PMID: 27153051.

Bassat, E. Mutlak, Y.E., Genzelinakh, A., Shadrin, I.Y., Baruch-Umansky, K., Yifa, O., Kain, D., Rajchman, D., Leach, J., Riabov, D., Udi, Y., Sarig, R., Sagi, I., Martin, J., Bursac, N., Cohen, S., Tzahor, E., "The Extracellular Matrix Protein Agrin Promotes Heart Regeneration in Mice," Nature, 2017. In Press.

Shadrin, I.Y., Khodabukus, A., Bursac, N., "Striated Muscle Function, Regeneration, and Repair," Cell Mol Life Sci. 2016 Nov;73(22):4175-4202. Epub 2016 Jun 6. PMID: 27271751  PMCID: PMC5056123

Zhang, D., Shadrin, I.Y., Lam, J., Xian, H., Snodgrass, R., Bursac, N., “Tissue-engineered Cardiac Patch for Advanced Functional Maturation of Human ESC-derived Cardiomyocytes.” Biomaterials. 2013 Jul;34(23):5813-20. doi: 10.1016/j.biomaterials. 2013.04.026. Epub 2013 May 2. PMID: 23642535   PMCID: PMC3660435

Shadrin IY, Yoon W, Li L, Shepherd N, Bursac N., Rapid fusion between mesenchymal stem cells and cardiomyocytes yields electrically active, non-contractile hybrid cells. 2015 Jul 10;5:12043. doi: 10.1038/srep12043. PMCID: PMC4498233

Jackman CP, Shadrin IY, Carlson AL, Bursac N, Human Cardiac Tissue Engineering: From Pluripotent Stem Cells to Heart Repair. Curr Opin Chem Eng. 2015 Feb;7:57-64. PMID: 25599018 [PubMed]  PMCID: PMC4293542

Washburne, A.D., Silverman, J.D., Leff, J.W., Bennett, D.J., Darcy, J.L., Mukherjee, S., Fierer, N., David, L.A., "Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets," PeerJ. 2017 Feb 9;5:e2969. doi: 10.7717/peerj.2969. eCollection 2017. PMID: 28289558  PMCID: PMC5345826

Silverman, J.D., Washburne, A.D., Mukherjee, S., David, L.A., "A phylogenetic transform enhances analysis of compositional microbiota data," Elife. 2017 Feb 15;6. pii: e21887. doi: 10.7554/eLife.21887.  PMID28198697  PMCID: PMC5328592

Yang J, Wang Z, Sinden DS, Wang X, Shan B, Yu X, Zhang H, Pitt GS, Wang C. FGF13 modulates the gating properties of the cardiac sodium channel Na(v)1.5 in an isoform-specific manner. Channels (Austin). 2016 May 31:1-11. [Epub ahead of print] PubMed PMID: 27246624.

Smith, J.S., Rajagopal, S., "The β-Arrestins: Multifunctional Regulators of G Protein-coupled Receptors," J Biol Chem. 2016 Apr 22;291(17):8969-77. doi: 10.1074/jbc.R115.713313. Epub 2016 Mar 16. PMID: 26984408  PMCID: PMC4861465

Abou-Donia, M.B., Siracuse, B., Gupta, N., Sobel Leondard, A., "Sarin (GB, O-isopropyl methylphosphonofluoridate) neurotoxicity: critical review," Crit Rev Toxicol. 2016 Nov;46(10):845-875. Epub 2016 Oct 5. PMID: 27705071

Leonard, J.A., Sobel Leonard, A., Chang, D.T., Edwards, S., Lu, J., Scholle, S., Key, P., Winter, M., Isaacs, K., Tan, Y.M., "Evaluating the Impact of Uncertainties in Clearance and Exposure When Prioritizing Chemicals Screened in High-Throughput Assays," Environ Sci Technol. 2016 Jun 7;50(11):5961-71. doi: 10.1021/acs.est.6b00374. Epub 2016 May 12. PMID: 27124219

Sobel Leonard, A., McClain, M.T., Smith, G.J., Wentworth, D.E., Halpin, R.A., Lin, X., Ransier, A., Stockwell, T.B., Das, S.R., Gilbert, A.S., Lambkin-Williams, R., Ginsburg, G.S., Woods, C.W., Koelle, K., "Deep Sequencing of Influenza A Virus from a Human Challenge Study Reveals a Selective Bottleneck and Only Limited Intrahost Genetic Diversification," J Virol. 2016 Nov 28;90(24):11247-11258. Print 2016 Dec 15. PMID: 27707932  PMCID: PMC5126380

Sobel Leonard, A., McClain, M.T., Smith, G.J., Wentworth, D.E., Halpin, R.A., Lin, X., Ransier, A., Stockwell, T.B., Das, S.R., Gilbert, A.S., Lambkin-Williams, R., Ginsburg, G.S., Woods, C.W., Koelle, K., Illingworth, C.J., "The effective rate of influenza reassortment is limited during human infection," PLoS Pathog. 2017 Feb 7;13(2):e1006203. doi: 10.1371/journal.ppat.1006203. eCollection 2017. PMID: 28170438  PMCID: PMC5315410

Gwinn ,W.M., Johnson, B.T., Kirwan, S.M., Sobel, A.E., Abraham, S.N., Gunn, M.D., Staats, H.F., "A comparison of non-toxin vaccine adjuvants for their ability to enhance the immunogenicity of nasally-administered anthrax recombinant protective antigen," Vaccine. 2013 Mar 1;31(11):1480-9. doi: 10.1016/j.vaccine.2013.01.012. Epub 2013 Jan 23. PMID:23352329   PMCID: PMC3622208

Tripuraneni, V., Patel, K., Brennan, T.V., Ho, L.M., "Fulminant herpes simplex viral hepatitis: ultrasound and CT imaging appearance and a review of the imaging literature," Clin Imaging. 2014 Mar-Apr;38(2):191-4. doi: 10.1016/ j.clinimag.2013.11.015. Epub 2013 Dec 4. PMID: 24387920

Elsamadicy, A.A., Chongsathidkiet, P., Desai, R., Woroniecka, K., Farber, S.H., Fecci, P.E., Sampson, J.H., "Prospect of rindopepimut in the treatment of glioblastoma," Expert Opin Biol Ther. 2017 Apr;17(4):507-513. doi: 10.1080/14712598.2017.1299705. Epub 2017 Mar 5.  PMID: 28274144

Weyandt, J.D., Carney, J.M., Pavlisko, E.N., Xu, M., Counter, C.M., "Isoform-Specific Effects of Wild-Type Ras Genes on Carcinogen-Induced Lung Tumorigenesis in Mice," PLoS One. 2016 Dec 2;11(12):e0167205. doi: 10.1371/journal.pone.0167205. eCollection 2016. PMID: 27911940  PMCID: PMC5135096

Webb, A.M., Tsipis, N.E., McClellan, T.R., McNeil, M.J., Xu, M., Doty, J.P., Taylor, D.C., "A first step toward understanding best practices in leadership training in undergraduate medical education: a systematic review," Acad Med. 2014 Nov;89(11):1563-70. doi: 10.1097/ACM.0000000000000502. PMID: 25250751

Pershing, N.L., Yang, C.J., Xu, M., Counter, C.M., "Treatment with the nitric oxide synthase inhibitor L-NAME provides a survival advantage in a mouse model of Kras mutation-positive, non-small cell lung cancer," Oncotarget, 9874:1949-2443, 2016.