Mari L. Shinohara

Mari L. Shinohara
Associate Professor of Immunology
Cell and Molecular Biology Program (CMB)
Campus mail: 338JONES Building, 207 Researc, Box 3010 DUMC, Durham, NC 27710
Phone: (919) 613-6977

We need to mount a strong immune response against pathogens during infections, but excessive and uncontrolled immune reactions can lead to autoimmunity.  How does our immune system keep the balance fine-tuned?  This is a central question being asked in my laboratory.

Immune system needs to detect pathogens quickly and effectively.  This is performed by the innate immune system, which includes cells such as macrophages and dendritic cells (DCs).  Pathogens are recognized by pattern recognition receptors (PRRs) and may be cleared in the innate immune system.  However, when pathogens cannot be eliminated by innate immunity, the adaptive immune system participates by exploiting the ability of T cells and B cells.  The two immune systems work together not only to clear pathogens effectively but also to avoid collateral damages by from our own immune responses.

In my lab, we use mouse models for infectious and autoimmune diseases to understand the cellular and molecular mechanisms of; pathogen recognition by PRRs in macrophages and DCs, initiation of inflammatory responses in the innate immune system, and the impact of innate immune inflammation on the development and regulation of T cell-mediated adaptive immune responses.

Several projects are ongoing in the lab.  They are; (1) elucidating the role of the NLRP3 inflammasome, an innate immune sensor of pathogens and endogenous danger signals, in T-cell mediated pathology of EAE (an animal model of multiple sclerosis), (2) dissecting molecular mechanisms of pathogen recognition through Toll-like receptors (TLRs) and c-type lectin receptors (CLRs) and of downregulating  hyperinflammation, (3) molecular and cellular mechanisms in the innate immune system to induce immune tolerance in T cells, and (4) elucidating a role of a protein termed osteopontin (OPN), as both secreted (sOPN) and intracellular (iOPN) isoforms, in regulation of immune responses during infections and tumor development.  Although we are very active in EAE to study autoimmunity, other mouse models, such as psoriasis and colitis are ongoing.  As for infections, we are interested in fungal infections, which have not been well explored as bacterial and viral infections.  Cell types we study are mainly DCs, macrophages, and T cells.  By focusing on these immune cell types, we study impacts of infections on the development of autoimmunity.

Education and Training


    Analysis of regulatory CD8 T cells in Qa-1-deficient mice.

    The mouse protein Qa-1 (HLA-E in humans) is essential for immunological protection and immune regulation. Although Qa-1 has been linked to CD8 T cell-dependent suppression, the physiological relevance of this observation is unclear.